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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939863.1_cds_XP_016484287.1_75315
CDS Infomation

[gene=LOC107804864] [db_xref=GeneID:107804864] [protein=shikimate O-hydroxycinnamoyltransferase-like] [protein_id=XP_016484287.1] [location=join(38285..38701,40191..41078)] [gbkey=CDS]
Sequence

ATGAGGATCAATATTAAGGAATCAATAATGGTAAAACCATCAAAGCCAACTCCTTCAAAA
AGACTATGGAACTCAAATTTGGATGTAATAGTGGGAAGAATTCATCTTTTGACAGTGTAT
TTCTACAAACCAAATGGAACTTCTCCAAATTTCTTTGATTTTAGAATTATGAAGGAGGCT
TTAAGCAATGTTTTAGTTTCATTTTATCCAATGGCTGGGAGATTGGCTAAGGATAATGAA
AAAGAAAGAATTGAGATAAATTGTAATGGAGAAGGGGTTCTTTTTATTGAAGCTGAAATT
GATGCTTTTATTGATGATTTTGGCGATTTTATTCCAAGTTTGGAGATCAAGAAGATGTTA
ATTCCTAGTGTTGATACTTCTGGTGACATCTCTTCTTTTCCACTTGTCATATTTCAGGTA
ACTCGTTTCAAGTGTGGTGGAATCTCCTTAGGGTGTGGCGTTTTCCATACATTATCTGAC
GGCATTTCATCCCTTCATTTCATCAACACATGGTCGGAAGTTGCCCGAGGCGTCTCCGTC
GCCGTCTCACCGTTCATCGACCGGTCCCTCCTTCATGCACGGGACCCACCAACCCCCGCT
TATAAACACGTCGAGTATCATTCTCCTCCGGCCCTAAAATCATCGTCAAAAAACGTTCAT
GATCAAGTTAGCGGTTCAAAATCCAGTACCAAAGCCATGTTTAAGATCACAAGTGACCAA
CTGACCCTACTCAAGACGAAGTCAAAACACGAGGGTAGTACATATGAAATACTCGCGGCC
CATATATGGCGATGCACGTGCAAAACACGTGTCCTAGACGATGACCAATTGACAAAGTTA
CATGTTGCTACAGATGGTAGGTCAAGACTTTTTCCTCCTTTACCACCAGGCTACTTAGGA
AATGTTGTTTTCACAGCTACACCAATTGCCAAATCTGGTGAAATTTTATCAGAGCCATTG
ATGAACACAGCTCAAAGAATTCATAGCGCGTTAGCAAGAATGGACGACGAATACTTAAGA
TCAGCGATAGATTATCTCGAATTACAGACAGATTTATCTAAATTAATCCGAGGACCGACG
TATTTTGCTAGTCCTAATCTTAATATTAACAGTTGGACTAGGTTGCCTGTTCATGATTCA
GATTTTGGATGGGGAAAACCAATTCATATGGGACCTGCTTGTATTTTGTATGAAGGGACA
GTTTACATATTGCCAAGTCCAAGTAATGACAAGAACTTGAGGTTGGCTGTGTGTTTAGAT
GCTGACCATATGCCACTTTTTGAGAAGTACTTGTATGAATTTTGA

Peptide Sequence

PEP ID

XP_016484287.1
PEP Infomation

PREDICTED: shikimate O-hydroxycinnamoyltransferase-like [Nicotiana tabacum]
Sequence

MRINIKESIMVKPSKPTPSKRLWNSNLDVIVGRIHLLTVYFYKPNGTSPNFFDFRIMKEA
LSNVLVSFYPMAGRLAKDNEKERIEINCNGEGVLFIEAEIDAFIDDFGDFIPSLEIKKML
IPSVDTSGDISSFPLVIFQVTRFKCGGISLGCGVFHTLSDGISSLHFINTWSEVARGVSV
AVSPFIDRSLLHARDPPTPAYKHVEYHSPPALKSSSKNVHDQVSGSKSSTKAMFKITSDQ
LTLLKTKSKHEGSTYEILAAHIWRCTCKTRVLDDDQLTKLHVATDGRSRLFPPLPPGYLG
NVVFTATPIAKSGEILSEPLMNTAQRIHSALARMDDEYLRSAIDYLELQTDLSKLIRGPT
YFASPNLNINSWTRLPVHDSDFGWGKPIHMGPACILYEGTVYILPSPSNDKNLRLAVCLD
ADHMPLFEKYLYEF

Transcript Sequence

Gene sequence data has not been registered.